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  1. Zhao, Liping ; Bello, Maria Gloria (Ed.)
    ABSTRACT Complex interactions exist among microorganisms in a community to carry out ecological processes and adapt to changing environments. Here, we constructed a quad-culture consisting of a cellulolytic bacterium ( Ruminiclostridium cellulolyticum ), a hydrogenotrophic methanogen ( Methanospirillum hungatei ), an acetoclastic methanogen ( Methanosaeta concilii ), and a sulfate-reducing bacterium ( Desulfovibrio vulgaris ). The four microorganisms in the quad-culture cooperated via cross-feeding to produce methane using cellulose as the only carbon source and electron donor. The community metabolism of the quad-culture was compared with those of the R. cellulolyticum -containing tri-cultures, bi-cultures, and mono-culture. Methane production was higher in the quad-culture than the sum of the increases in the tri-cultures, which was attributed to a positive synergy of four species. In contrast, cellulose degradation by the quad-culture was lower than the additive effects of the tri-cultures which represented a negative synergy. The community metabolism of the quad-culture was compared between a control condition and a treatment condition with sulfate addition using metaproteomics and metabolic profiling. Sulfate addition enhanced sulfate reduction and decreased methane and CO 2 productions. The cross-feeding fluxes in the quad-culture in the two conditions were modeled using a community stoichiometric model. Sulfate addition strengthened metabolic handoffs from R. cellulolyticum to M. concilii and D. vulgaris and intensified substrate competition between M. hungatei and D. vulgaris . Overall, this study uncovered emergent properties of higher-order microbial interactions using a four-species synthetic community. IMPORTANCE A synthetic community was designed using four microbial species that together performed distinct key metabolic processes in the anaerobic degradation of cellulose to methane and CO 2 . The microorganisms exhibited expected interactions, such as cross-feeding of acetate from a cellulolytic bacterium to an acetoclastic methanogen and competition of H 2 between a sulfate reducing bacterium and a hydrogenotrophic methanogen. This validated our rational design of the interactions between microorganisms based on their metabolic roles. More interestingly, we also found positive and negative synergies as emergent properties of high-order microbial interactions among three or more microorganisms in cocultures. These microbial interactions can be quantitatively measured by adding and removing specific members. A community stoichiometric model was constructed to represent the fluxes in the community metabolic network. This study paved the way toward a more predictive understanding of the impact of environmental perturbations on microbial interactions sustaining geochemically significant processes in natural systems. 
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  2. Free, publicly-accessible full text available January 23, 2025
  3. The role of hydroxyl radicals (OH) as a daytime oxidant is well established on a global scale. In specific source regions, such as the marine boundary layer and polluted coastal cities, other daytime oxidants, such as chlorine atoms (Cl) and even bromine atoms (Br), may compete with OH for the oxidation of volatile organic compounds (VOCs) and/or enhance the overall oxidation capacity of the atmosphere. However, the number of studies investigating halogen-initiated secondary organic aerosol (SOA) formation is extremely limited, resulting in large uncertainties in these oxidative aging processes. Here, we characterized the chemical composition and yield of laboratory SOA generated in an oxidation flow reactor (OFR) from the OH and Cl oxidation of n -dodecane ( n -C 12 ) and toluene, and the OH, Cl, and Br oxidation of isoprene and α-pinene. In the OFR, precursors were oxidized using integrated OH, Cl, and Br exposures ranging from 3.1 × 10 10 to 2.3 × 10 12 , 6.1 × 10 9 to 1.3× 10 12 and 3.2 × 10 10 to 9.7 × 10 12 molecules cm −3 s −1 , respectively. Like OH, Cl facilitated multistep SOA oxidative aging over the range of OFR conditions that were studied. In contrast, the extent of Br-initiated SOA oxidative aging was limited. SOA elemental ratios and mass yields obtained in the OFR studies were comparable to those obtained from OH and Cl oxidation of the same precursors in environmental chamber studies. Overall, our results suggest that alkane, aromatic, and terpenoid SOA precursors are characterized by distinct OH- and halogen-initiated SOA yields, and that while Cl may enhance the SOA formation potential in regions influenced by biogenic and anthropogenic emissions, Br may have the opposite effect. 
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  4. The main nucleating vapor in the atmosphere is thought to be sulfuric acid (H2SO4), stabilized by ammonia (NH3). However, in marine and polar regions, NH3is generally low, and H2SO4is frequently found together with iodine oxoacids [HIOx, i.e., iodic acid (HIO3) and iodous acid (HIO2)]. In experiments performed with the CERN CLOUD (Cosmics Leaving OUtdoor Droplets) chamber, we investigated the interplay of H2SO4and HIOxduring atmospheric particle nucleation. We found that HIOxgreatly enhances H2SO4(-NH3) nucleation through two different interactions. First, HIO3strongly binds with H2SO4in charged clusters so they drive particle nucleation synergistically. Second, HIO2substitutes for NH3, forming strongly bound H2SO4-HIO2acid-base pairs in molecular clusters. Global observations imply that HIOxis enhancing H2SO4(-NH3) nucleation rates 10- to 10,000-fold in marine and polar regions.

     
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    Free, publicly-accessible full text available December 15, 2024
  5. Abstract. Aerosol particles have an important role in Earth'sradiation balance and climate, both directly and indirectly throughaerosol–cloud interactions. Most aerosol particles in the atmosphere areweakly charged, affecting both their collision rates with ions and neutralmolecules, as well as the rates by which they are scavenged by other aerosolparticles and cloud droplets. The rate coefficients between ions and aerosolparticles are important since they determine the growth rates and lifetimesof ions and charged aerosol particles, and so they may influence cloudmicrophysics, dynamics, and aerosol processing. However, despite theirimportance, very few experimental measurements exist of charged aerosolcollision rates under atmospheric conditions, where galactic cosmic rays inthe lower troposphere give rise to ion pair concentrations of around 1000 cm−3. Here we present measurements in the CERN CLOUD chamber of therate coefficients between ions and small (<10 nm) aerosol particlescontaining up to 9 elementary charges, e. We find the rate coefficient of asingly charged ion with an oppositely charged particle increases from 2.0(0.4–4.4) × 10−6 cm3 s−1 to 30.6 (24.9–45.1) × 10−6 cm3 s−1 for particles with charges of 1 to9 e, respectively, where the parentheses indicate the ±1σuncertainty interval. Our measurements are compatible with theoreticalpredictions and show excellent agreement with the model ofGatti and Kortshagen (2008). 
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  6. Abstract. Currently, the complete chemical characterization of nanoparticles(< 100 nm) represents an analytical challenge, since these particlesare abundant in number but have negligible mass. Several methods forparticle-phase characterization have been recently developed to betterdetect and infer more accurately the sources and fates of sub-100 nmparticles, but a detailed comparison of different approaches is missing.Here we report on the chemical composition of secondary organic aerosol(SOA) nanoparticles from experimental studies of α-pinene ozonolysisat −50, −30, and −10 ∘C and intercompare the results measured by differenttechniques. The experiments were performed at the Cosmics Leaving OUtdoorDroplets (CLOUD) chamber at the European Organization for Nuclear Research(CERN). The chemical composition was measured simultaneously by fourdifferent techniques: (1) thermal desorption–differential mobility analyzer(TD–DMA) coupled to a NO3- chemical ionization–atmospheric-pressure-interface–time-of-flight (CI–APi–TOF) massspectrometer, (2) filter inlet for gases and aerosols (FIGAERO) coupled to anI− high-resolution time-of-flight chemical ionization mass spectrometer(HRToF-CIMS), (3) extractive electrospray Na+ ionizationtime-of-flight mass spectrometer (EESI-TOF), and (4) offline analysis offilters (FILTER) using ultra-high-performance liquid chromatography (UHPLC)and heated electrospray ionization (HESI) coupled to an Orbitraphigh-resolution mass spectrometer (HRMS). Intercomparison was performed bycontrasting the observed chemical composition as a function of oxidationstate and carbon number, by estimating the volatility and comparing thefraction of volatility classes, and by comparing the thermal desorptionbehavior (for the thermal desorption techniques: TD–DMA and FIGAERO) andperforming positive matrix factorization (PMF) analysis for the thermograms.We found that the methods generally agree on the most important compoundsthat are found in the nanoparticles. However, they do see different parts ofthe organic spectrum. We suggest potential explanations for thesedifferences: thermal decomposition, aging, sampling artifacts, etc. Weapplied PMF analysis and found insights of thermal decomposition in theTD–DMA and the FIGAERO. 
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